biocontext_kb.core.panglaodb
============================

.. py:module:: biocontext_kb.core.panglaodb


Functions
---------

.. autoapisummary::

   biocontext_kb.core.panglaodb.get_panglaodb_marker_genes
   biocontext_kb.core.panglaodb.get_panglaodb_options


Package Contents
----------------

.. py:function:: get_panglaodb_marker_genes(species, min_sensitivity = None, min_specificity = None, organ = None, cell_type = None, gene_symbol = None)

   Retrieve marker genes from PanglaoDB dataset with optional filters. Supports filtering by species, scores, organ, cell type, gene symbol.

   :returns: Markers array with gene symbols, cell types, organs, sensitivity/specificity scores or error message.
   :rtype: dict


.. py:function:: get_panglaodb_options()

   Retrieve available filter options for PanglaoDB marker genes. Returns unique values for organs and cell types.

   :returns: Lists of unique organ and cell_type values available in PanglaoDB dataset or error message.
   :rtype: dict